MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Ligilactobacillus murinus 2_2BalbC1BO2_S2

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 224

bases: 2,332,310 bps

CDS: 2,313

rRNA: 6

Repeat region:

tmRNA: 1

tRNA: 61

misc RNA:

Total features: 2,381

Total number of protein coding genes annotated/found: 2,313

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5054\|JADGLU010000079.1	SEQF5054_00994	NA AA	426/142	98636-98211	IS30 family transposase IS1062
SEQF5054\|JADGLU010000079.1	SEQF5054_00993	NA AA	453/151	97510-97962	hypothetical protein
SEQF5054\|JADGLU010000079.1	SEQF5054_00992	NA AA	1005/335	96496-97500	hypothetical protein
SEQF5054\|JADGLU010000079.1	SEQF5054_00991	NA AA	873/291	95613-96485	hypothetical protein
SEQF5054\|JADGLU010000079.1	SEQF5054_00990	NA AA	720/240	94813-95532	hypothetical protein
SEQF5054\|JADGLU010000141.1	SEQF5054_01607	NA AA	513/171	94125-94637	tRNA (cytidine(34)-2'-O)-methyltransferase
SEQF5054\|JADGLU010000079.1	SEQF5054_00989	NA AA	1161/387	93592-94752	Hydroxymethylglutaryl-CoA synthase
SEQF5054\|JADGLU010000079.1	SEQF5054_00988	NA AA	276/92	93468-93193	Acylphosphatase
SEQF5054\|JADGLU010000079.1	SEQF5054_00987	NA AA	912/304	93097-92186	Membrane protein insertase YidC
SEQF5054\|JADGLU010000141.1	SEQF5054_01606	NA AA	858/286	93075-93932	23S rRNA (guanine(745)-N(1))-methyltransferase
SEQF5054\|JADGLU010000141.1	SEQF5054_01605	NA AA	510/170	92557-93066	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
SEQF5054\|JADGLU010000141.1	SEQF5054_01604	NA AA	978/326	92335-91358	GMP reductase
SEQF5054\|JADGLU010000141.1	SEQF5054_01603	NA AA	363/121	90941-91303	hypothetical protein
SEQF5054\|JADGLU010000141.1	SEQF5054_01602	NA AA	1017/339	90747-89731	6-phosphogluconolactonase
SEQF5054\|JADGLU010000079.1	SEQF5054_00986	NA AA	1530/510	90627-92156	Adaptive-response sensory-kinase SasA
SEQF5054\|JADGLU010000079.1	SEQF5054_00985	NA AA	687/229	89941-90627	Response regulator ArlR
SEQF5054\|JADGLU010000141.1	SEQF5054_01601	NA AA	636/212	89716-89081	Copper homeostasis protein CutC
SEQF5054\|JADGLU010000146.1	SEQF5054_01717	NA AA	321/107	89599-89279	hypothetical protein
SEQF5054\|JADGLU010000146.1	SEQF5054_01716	NA AA	570/190	88914-88345	hypothetical protein
SEQF5054\|JADGLU010000079.1	SEQF5054_00984	NA AA	1425/475	88257-89681	6-phosphogluconate dehydrogenase%2C decarboxylating

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Page last updated: July 7, 2021 08:39:35